BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028G06SP1|AL428959
(824 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1471 1615 0.0
>3x_Contig1471
Length = 8032
Score = 1615 bits (814), Expect = 0.0
Identities = 821/824 (99%)
Strand = Plus / Minus
Query: 1 ggtagaatgaatgctaatgcagtcgatattggaaacagcataactggttaagctcggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4159 ggtagaatgaatgctaatgcagtcgatattggaaacagcataactggttaagctcggctg 4100
Query: 61 cattcttgacggtcagaagtggccactggtataagtggggccagtggggtctgttatttc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4099 catttttgacggtcagaagtggccactggtataagtggggccagtggggtctgttatttc 4040
Query: 121 ctcattcagataatcgcacactacgaacgttgctgctgtttcggacgccagactaggcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4039 ctcattcagataatcgcacactacgaacgttgctgctgtttcggacgccagactaggcca 3980
Query: 181 aacagtgtagactgtcaattgaaaacaatcagaaatggtcgtcttaccgatttcttaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3979 aacagtgtagactgtcaattgaaaacaatcagaaatggtcgtcttaccgatttcttaggt 3920
Query: 241 actggctctaggaaatggagtgaatagcgcagttttgtgctttgtgcggtagacggaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3919 actggctctaggaaatggagtgaatagcgcagttttgtgctttgtgcggtagacggaata 3860
Query: 301 aactgtataggcaaccagtaaaaggatctacgagtgaactagtaagttacaaagtggaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3859 aactgtataggcaaccagtaaaaggatctacgagtgaactagtaagttacaaagtggaat 3800
Query: 361 tgattggcccattataaaggctgtgcaggagtccgaacatctcagaaaaccatttacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3799 tgattggcccattataaaggctgtgcaggagtccgaacatctcagaaaaccatttacaaa 3740
Query: 421 atgagctgcctacctacatggttctttctttttattcacacaagttgcaccaatcgatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3739 atgagctgcctacctacatggttctttctttttattcacacaagttgcaccaatcgatgt 3680
Query: 481 gcttgtttcgagtgagccagtagctgattttcattttctttttttttttttggccttagg 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3679 gcttgtttcgagtgagcaagtagctgattttcattttctttttttttttttggccttagg 3620
Query: 541 gaaaacttactaggaacatgaaaaggtagttgttataatggattgtwgtgggtaggtagg 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3619 gaaaacttactaggaacatgaaaaggtagttgttataatggattgtagtgggtaggtagg 3560
Query: 601 ttgaggcatttctggtacattccgtatattcgagtgtgctcgctgtaccctctgcaggtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3559 ttgaggcatttctggtacattccgtatattcgagtgtgctcgctgtaccctctgcaggtg 3500
Query: 661 tactggctcccaatattattcttttttttcgttcaaattgtgagaaacagagagagagag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3499 tactggctcccaatattattcttttttttcgttcaaattgtgagaaacagagagagagag 3440
Query: 721 agaaaacgaaacggcatcctgtaattacccgaagcaatattgggtcatatacctgctaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3439 agaaaacgaaacggcatcctgtaattacccgaagcaatattgggtcatatacctgctaaa 3380
Query: 781 acccggtcaatattgacgtactttcttttcggaataacaagtat 824
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3379 acccggtcaatattgacgtactttcttttcggaataacaagtat 3336
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,704
Number of Sequences: 1807
Number of extensions: 13704
Number of successful extensions: 474
Number of sequences better than 1.0e-20: 1
length of query: 824
length of database: 10,358,551
effective HSP length: 16
effective length of query: 808
effective length of database: 10,329,639
effective search space: 8346348312
effective search space used: 8346348312
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)